Cost calculator

Welcome to our cost-saving calculator. This tool is designed to help you compare the costs between the OncoDEEP^® Kit from OncoDNA and the Illumina TSO500. By inputting relevant data, such as sequencing volume and consumable expenses, you can show how cost effective is OncoDEEP^® and make informed decision.

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OncoDEEP Kit

Flow cell model

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NextSeq 500 Mid output Price: 1.382.00 €
NextSeq 500 High output Price: 3.626.00 €
Nextseq 2000 P1 Price: 1.234.00 €
Nextseq 2000 P2 Price: 2.702.00 €
Nextseq 2000 P3 Price: 4.552.00 €
Nextseq 2000 P4 Price: 4.735.00 €
Novaseq 6000 SP Price: 3.156.00 €
Novaseq 6000 S1 Price: 5.566.00 €
Novaseq 6000 S2 Price: 10.325.00 €

Number of samples

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8 (16-19Gb en 2x75bp)
16 (2 runs per week)
24 (3 runs per week)

Number of samples

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24 (50-60Gb en 2 x 75bp)
48 (2 runs a week)

Number of samples

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8 (30Gb en 2x150bp)
16 (2 runs a week)
24 (3 runs a week)

Number of samples

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32 (80Gb en 2x100bp)
64 (2 runs per week)
96 (3 runs per week)

Number of samples

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96 (240Gb en 2x100bp)

Number of samples

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192 (360Gb en 2x100bp)

Number of samples

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64 (134-167Gb en 2x100bp)

Number of samples

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128 (266-333Gb en 2x100bp)

Number of samples

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336 (667-833Gb en 2x100bp)

Cost calculation

Name Total

Flow cell model 0.00 €

DNA library 390 €

BioIT - Secondary Analysis (Included) 0 €

HRD Testing (included) 0 €

Clinical Interpretation in OncoKDM (Included) 0 €

Sequencing 0 €

Total cost per sample (approx.) 390 €

Name

Message

OncoDEEP Kit.pdf

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TSO500

Flow cell model

Select value

Select value
NextSeq 500 Mid output Price: 2.507.00 €
NextSeq 500 High output Price: 5.697.00 €
Nextseq 2000 P1 Price: 1.234.00 €
Nextseq 2000 P2 Price: 2.702.00 €
Nextseq 2000 P3 Price: 4.552.00 €
Nextseq 2000 P4 Price: 4.735.00 €
Novaseq 6000 SP Price: 3.156.00 €
Novaseq 6000 S1 Price: 5.566.00 €
Novaseq 6000 S2 Price: 10.325.00 €

Number of samples

Select value

Select value
8 (32-39Gb en 2x150bp)
16 (2 runs per week)
24 (3 runs per week)

Number of samples

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8 (100-120Gb en 2 x 150bp)
16 (2 runs a week)
24 (3 runs a week)

Number of samples

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8 (30Gb en 2x150bp)

Number of samples

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8 (80Gb en 2x100bp)
16 (2 runs per week)
24 (3 runs per week)
32 (4 runs per week)

Number of samples

Select value

Select value
24 (240Gb en 2x100bp)
48 (2 runs per week)
96 (4 runs per week)

Number of samples

Select value

Select value
16 (134-167Gb en 2x100bp)
32 (2 runs per week)
64 (4 run

Number of samples

Select value

Select value
16 (134-167Gb en 2x100bp)
32 (2 runs per week)
64 (4 runs)

Number of samples

Select value

Select value
32 (266-333Gb en 2x100bp)
64 (2 runs per week)
96 (3 runs per week)

Number of samples (copy 1)

Select value

Select value
72 (667-833Gb en 2x100bp)

Cost calculation

Name Total

Flow cell model 0.00 €

DNA library 360 €

BioIT - Secondary Analysis (▲) 35 €

Clinical Interpretation (tertiary analysis)* 89 €

Sequencing 0 €

Total cost per sample (approx.) 484 €

Name

Message

TSO500.pdf

Data used to design this calculator were extracted from an independent study that has been presented at the AACR24 ⁽¹⁾ and AMP24 ⁽²⁾ and which highlights the fact that “OncoDEEP Kit’s mean coverage of the samples is more uniform thereby allowing to pool 2- to 3-times more samples per seq run.” The calculator assumes that the sample quality is good. OncoDNA acknowledges that poor sample quality can lead to suboptimal data and may require a detailed analysis of the raw data.

These estimations are approximate, derived from reagents from extracted DNA to ready-to-sequence captures, flow cell, data analysis and interpretation expenses alone. The use of lab equipment or general lab reagents needed is not taken into account We recommend users conduct their assessments before finalizing any procurement decisions. For further assistance, please reach out to OncoDNA’s sales team.

* Please note that the competitor placeholder values mentioned above represent published list prices of the Illumina TSO500 kit consumables, BioIT process and interpretation software. Third-party trademarks mentioned belong to their respective owners and are utilized here solely for identification purposes, with no implication of endorsement.

** As demonstrated in a recent study (1), the exceptional coverage uniformity OncoDEEP^® Kits allows to sequence more samples on the same budget without sacrificing the quality of result at all. Having eliminated the need to over sequence, OncoDEEP^® Kits allow users to pool more samples on the sequencing platform, ultimately leading to cost reduction. It has been reported that OncoDEEP^® DNA Kit supports the pooling of at least 3X more samples when compared to TSO500.

(▲) Secondary analysis cost calculation model: Licence fee per year: 25.583€ / (24 * 30) (Quantity of samples per week: 24 * number of sequencing weeks)

(1) Comprehensive Genomic Profiling of solid tumor patients with the OncoDEEP assay for broad analysis in clinical diagnostics, Hendrikus Jan Dubbink, et al. (AACR 2024)

(2) Comprehensive Genomic Profiling of solid tumor patients with the OncoDEEP assay for broad analysis in clinical diagnostics, Froyen, et al.(AMP 2024)

Cost calculator

2 runs a week possible